Search for your favorite variant, genomic region, or gene to browse experimental data and computational predictions from the IGVF Consortium and other data sources.
Search for a variant, genomic region, or gene
Currently, the Catalog includes a preview of IGVF measurements and predictions, including:
- Saturation mutagenesis of coding variants in 10 genes (VAMP-seq, SGE)
- Variant effect predictions for all amino acid substitutions (MutPred2, ESM-v1)
- Enhancer-gene predictions in 1700 biosamples (ENCODE-rE2G)
- STARR-seq predictions of variant effects in (K562 cells) (BlueSTARR)
- MPRA measurements of variant effects
The IGVF Catalog also integrates information from the eQTL Catalogue, GWAS Catalog, ENCODE, and other resources. See Data Sources.
Related Apps
Other web resources to view certain IGVF data
FAVOR
View annotations for every possible single-nucleotide variant
MaveDB
Explore MAVE experiments from IGVF and other projects
IGVF Coding Variants
Explore MAVE data from IGVF
Lipids Knowledge Portal Network
Explore functional annotations at GWAS signals for lipid traits
E2G
View enhancer-gene predictions from ENCODE, IGVF, and other projects
RegulomeDB
View annotations of noncoding variants from ENCODE
IGVF Data Portal
Primary ingestion point for raw IGVF files, processed pipelines, and metadata submissions.
DACC IGVF Catalog
The application you are currently using—the DACC-built catalog that links variants, genes, regions, and ontologies.
Explore the API
Access IGVF Consortium datasets programmatically through our comprehensive API, enabling seamless integration of genomic variation and functional data into your research workflows.
Documentation
Access detailed documentation and examples demonstrating how to query, visualize, and integrate IGVF resources. Future updates will expand use cases and API coverage.
IGVF Chatbot
The IGVF Chatbot assists users by translating natural language queries into AQL, retrieving results directly from our knowledge graph.